一、基本信息
宋宝兴，男，1987年9月出生于山东德州。植物学专业博士，js555888金沙老品牌教授、博士生导师。入选国家高层次人才青年项目。国际玉米遗传协会会员、中国生物工程学会计算生物学与生物信息学专业委员会委员、Sigma Xi 科学研究协会会员。《BMC Genomics》杂志编委、《New Crops》杂志编委、《Beverage Plant Research》期刊青年编委、《iMeta》期刊青年编委。担任《Nature Plants》、《Genome Research》、《Bioinformatics》等杂志审稿人。
二、学习工作经历
2023-今 js555888金沙老品牌 教授，博士生导师
2018-2022 美国康奈尔大学博士后
2014-2018 德国马克斯·普朗克植物育种研究所博士
2010-2013 js555888金沙老品牌硕士
2006-2010 郑州大学学士
三、研究方向
致力于通过玉米和禾本科植物的遗传研究，实现高效、环境友好、并可持续的农业发展模式。通过开发并应用前沿的分子进化和群体遗传学理论，挖掘长期进化过程中的关键农业性状和环境适应性的主效基因并解析其分子机制并应用于分子设计育种。
课题组致力于培养善于独立思考、勇于探索、具有领导力的青年科学家。欢迎生命科学、数学或计算机科学相关背景的学生报考。鼓励有意向攻读硕士或博士研究生学位的同学提前以实习生或科研助理的身份加入实验室进行深入了解，优先接收在本实验室实习过的候选人。
四、科研成果
1、代表性论文（#，equal contribution; *，corresponding）
（1）Baoxing Song*, Edward S. Buckler, Michelle C. Stitzer*. New whole-genome alignment tools are need for tapping plant diversity. Trends in Plant Science. 2023
（2）Baoxing Song*, Santiago Marco-Sola, Miquel Moreto, Lynn Johnson, Edward S. Buckler*, Michelle C. Stitzer*. AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication. PNAS. 2022
（3）Baoxing Song*, Edward S. Buckler, Hai Wang, Yaoyao Wu, Evan Rees, Elizabeth A. Kellogg, Daniel J. Gates, Merritt Khaipho-Burch, Peter J. Bradbury, Jeffrey Ross-Ibarra, Matthew B. Hufford and M. Cinta Romay*. Conserved noncoding sequences provide insights into regulatory sequence and loss of gene expression in maize. Genome Research. 2021
（4）Baoxing Song, Richard Mott, Xiangchao Gan*. Recovery of novel association loci in Arabidopsis thaliana and Drosophila melanogaster through leveraging INDELs association and integrated burden test. PLoS Genetics. 2018
（5）Guang Yang#, Yan Pan#, Wenqiu Pan#, Qingting Song, Ruoyu Zhang, Wei Tong, Licao Cui, Wanquan Ji, Weining Song, Baoxing Song*, Pingchuan Deng*, Xiaojun Nie*. Combined GWAS and eGWAS reveals the genetic basis underlying drought tolerance in emmer wheat (Triticum turgidum L.). New Phytologist. 2024
（6）Baoxing Song*#, Qing Sang#, Hai Wang, Huimin Pei, XiangChao Gan* and Fen Wang*. Complement Genome Annotation Lift Over Using a Weighted Sequence Alignment Strategy. Frontiers in Genetics. 2019
（7）Fen Wang*#, Baohui Zhang#, Di Wen#, Rong Liu, Xinzhuan Yao, Zhi Chen, Ren Mu, Huimin Pei, Min Liu, Baoxing Song* and Litang Lu*. Chromosome-scale genome assembly of Camellia sinensis combined with multi-omics provides insights into its responses to infestation with green leafhoppers. Frontiers in Plant Science. 2022
（8）Fen Wang, Zhi Chen, Huimin Pei, Zhiyou Guo, Di Wen, Rong Liu, Baoxing Song*. Transcriptome profiling analysis of tea plant (Camellia sinensis) using Oxford Nanopore long-read RNA-Seq technology. Gene. 2021
（9）Fen Wang#, Baoxing Song#, Xing Zhao, Yaotian Miao, Dengyun Li, Na Zhou, Pengfei Jiang, Qing Sang, Jingfei Huang, Deli Zhang*. Prediction and analysis of the protein-protein interaction networks for chickens, cattle, dogs, horses and rabbits. Current bioinformatics. 2016
（10）Baoxing Song#, Fen Wang#, Yang Guo, Qing Sang, Min Liu, Dengyun Li, Wei Fang, Deli Zhang. Protein–protein interaction network‐based detection of functionally similar proteins within species. Proteins: Structure, Function, and Bioinformatics. 2012
（11）Baoxing Song, Xiaoquan Su, Jian Xu, Kang Ning*. MetaSee: an interactive and extendable visualization toolbox for metagenomic sample analysis and comparison. PLoS One. 2012
2、软件著作权
(1) 宋宝兴; GEnomic sequence and genome structure ANnotation liftover, 2020SR0584132
(2) 宋宝兴 ; AnchorWave软件1.2.2, 2024SR0297907
3、大会报告
（1）Baoxing Song; AnchorWave: sensitive alignment of genomes with high diversity, structural polymorphism and whole-genome duplication variation, 2022 Maize Genetics Meeting, 美国圣路易斯
（2）Baoxing Song; Santiago Marco-Sola; Miquel Moreto; Lynn Johnson; Edward S. Buckler; Michelle C. Stitzer ; AnchorWave: sensitive alignment of genomes with high diversity, structural polymorphism and whole-genome duplication, Biodiversity Genomics 2022, 美国加州戴维斯
五、联系方式
通讯地址：陕西杨凌邰城路3号js555888金沙老品牌
邮编： 712100
E-mail： songbaoxing168@163.com
